Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC010153.1-201ENST00000432862 727 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 MTND4LP10-201ENST00000435146 291 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 SNRPGP9-201ENST00000456025 225 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC096751.1-202ENST00000502691 1067 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 MTCO3P28-201ENST00000513351 515 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AP003122.4-201ENST00000530980 758 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC123904.2-201ENST00000548059 300 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC125611.2-201ENST00000551907 647 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 SETP7-201ENST00000552169 453 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC040904.1-201ENST00000590850 223 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC128687.1-201ENST00000605304 619 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AL355472.4-201ENST00000610233 626 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC008443.7-201ENST00000622195 246 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC095031.1-201ENST00000623685 672 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AP003399.1-201ENST00000637534 361 ntBASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.46□□□□□ -2.02
TRIM49D1C9J1S8 AC090740.1-201ENST00000623193 2262 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC233263.6-201ENST00000631132 1963 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 Y_RNA.46-201ENST00000362695 102 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 RNU6-859P-201ENST00000362728 107 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 Y_RNA.111-201ENST00000363248 100 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 RNU6-1155P-201ENST00000363554 107 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 RNU6-501P-201ENST00000364072 100 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 RNU6-7-201ENST00000364784 107 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 RNU6-8-201ENST00000365467 107 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 RNU1-39P-201ENST00000383897 165 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 RNU1-109P-201ENST00000383960 147 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 Y_RNA.553-201ENST00000384670 102 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 SNORA41-201ENST00000384675 132 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 RN7SKP266-201ENST00000410232 287 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 RNU6-195P-201ENST00000411352 109 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 MTCO1P17-201ENST00000411522 491 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AL356583.2-201ENST00000426536 280 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 CR769767.1-201ENST00000436337 346 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 MTND1P30-201ENST00000441241 901 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 USP9YP29-201ENST00000445112 563 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 TPT1P14-201ENST00000448018 505 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC009961.3-201ENST00000449832 765 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 TPT1P7-201ENST00000458300 517 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AP000797.1-201ENST00000478870 387 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 RN7SKP132-201ENST00000516001 208 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 RNU6-528P-201ENST00000516926 100 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AP003467.2-201ENST00000520175 319 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AP003181.2-201ENST00000528941 181 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 CR383656.7-201ENST00000548164 174 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AL353997.4-201ENST00000586196 166 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AP001429.1-201ENST00000602568 530 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC007619.2-201ENST00000605743 379 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC009570.1-201ENST00000609599 745 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 MIR7106-201ENST00000612419 65 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AL158063.1-201ENST00000615349 536 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC006927.3-201ENST00000638789 384 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC099654.13-201ENST00000639774 207 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC092125.1-201ENST00000562568 1995 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 AC244517.1-201ENST00000606030 2086 ntBASIC2.45□□□□□ -2.02
TRIM49D1C9J1S8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 AL356473.1-201ENST00000406203 1408 ntBASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 RPS3AP36-201ENST00000398190 775 ntBASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 RPS3AP24-201ENST00000407896 734 ntBASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 MTCO2P5-201ENST00000422621 426 ntBASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 SNRPEP7-201ENST00000438350 220 ntBASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 RAC1P7-201ENST00000445367 377 ntBASIC2.44□□□□□ -2.02
TRIM49D1C9J1S8 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms