Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 AC068790.4-201ENST00000602474 263 ntBASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 AL590392.1-201ENST00000604960 446 ntBASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 AC034229.4-201ENST00000607861 441 ntBASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 AC069234.5-201ENST00000611056 416 ntBASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 AL359198.2-201ENST00000611836 194 ntBASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 uc_338.14-201ENST00000613162 166 ntBASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 AL109809.4-201ENST00000603520 2185 ntBASIC3.26□□□□□ -1.89
HMGB1P1B2RPK0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AL121657.1-201ENST00000327215 531 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 RNU1-52P-201ENST00000384190 164 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AL139109.1-201ENST00000455491 297 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 BTF3P15-201ENST00000455606 336 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 KLF3P2-201ENST00000465138 268 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AC006445.1-201ENST00000491925 405 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 RNA5SP337-201ENST00000517007 109 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 RNU6-1315P-201ENST00000517187 99 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AC011979.2-201ENST00000527568 352 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 PARP1P2-201ENST00000556806 195 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 LINC00933-203ENST00000559812 219 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AL158032.1-201ENST00000605401 106 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 SNORD14A-201ENST00000606526 91 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 MIR15A-201ENST00000607334 83 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AC006927.3-201ENST00000638789 384 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AC108206.1-201ENST00000570186 4159 ntBASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGB1P1B2RPK0 AC073346.2-201ENST00000624724 2058 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 SNORA67.1-201ENST00000364749 141 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 Y_RNA.534-201ENST00000384599 112 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 RAB9AP3-201ENST00000412737 573 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 MICF-203ENST00000432679 129 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 AC119618.1-201ENST00000434191 222 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 AC092641.1-201ENST00000440229 772 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 EPS15P1-201ENST00000448836 336 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 RAB9AP1-201ENST00000449393 573 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 RPL36AP48-201ENST00000485521 314 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 RPS3AP22-201ENST00000488297 769 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 AC023194.1-201ENST00000493084 308 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 RNA5SP112-201ENST00000515937 99 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 TRMT10BP1-201ENST00000519377 943 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 RAB9BP1-201ENST00000519581 626 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 AC025678.1-201ENST00000567861 338 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 AC022022.2-201ENST00000602989 360 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 RPL12P50-201ENST00000603116 116 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 AC010591.1-201ENST00000603941 649 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 AL161756.2-201ENST00000604597 246 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 AC011890.2-201ENST00000613393 294 ntBASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGB1P1B2RPK0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 Z75746.1-201ENST00000440243 2080 ntBASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 AC009487.2-201ENST00000420969 6821 ntBASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 RNU6-500P-201ENST00000362349 107 ntBASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 SNORA70C-201ENST00000384538 135 ntBASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 XKRYP1-201ENST00000423438 492 ntBASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 XKRYP2-201ENST00000432915 492 ntBASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 AC112771.1-201ENST00000463581 102 ntBASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 AC090515.1-201ENST00000465295 476 ntBASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 AC026801.1-201ENST00000497178 464 ntBASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 AC010587.1-201ENST00000505809 469 ntBASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
HMGB1P1B2RPK0 RN7SKP272-201ENST00000516988 232 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms