Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU6-1256P-201ENST00000516539 103 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AL161798.1-201ENST00000604630 131 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AL158032.1-201ENST00000605401 106 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 UBE2L2-201ENST00000254302 429 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RNU6-1167P-201ENST00000363227 94 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RNU6-715P-201ENST00000365204 103 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 SNORA32.2-201ENST00000384049 122 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RNU6-434P-201ENST00000384376 107 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RNU6-393P-201ENST00000384475 107 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 Y_RNA.529-201ENST00000384586 119 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 SNORD70.1-201ENST00000391007 85 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 EIF4E2P1-201ENST00000393781 255 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RNA5SP239-201ENST00000410218 129 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RNU2-33P-201ENST00000410344 192 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 BX682237.1-201ENST00000415016 335 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RPL32P28-201ENST00000443577 397 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RNU7-167P-201ENST00000459160 62 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RPL21P10-201ENST00000463521 490 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 VN1R17P-201ENST00000472048 1090 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 TRBVA-201ENST00000498804 316 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RNU2-69P-201ENST00000516061 100 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RNU6-864P-201ENST00000516256 108 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RNA5SP468-201ENST00000516782 93 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RANP9-201ENST00000519957 271 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 AC105029.1-201ENST00000520250 669 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 AP001804.3-201ENST00000525146 880 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 SCOCP1-201ENST00000554676 349 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 MIR4660-201ENST00000583549 74 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 AC098826.3-201ENST00000603823 466 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 MTND1P37-201ENST00000636562 264 ntBASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CCDC85CA6NKD9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 FTLP6-201ENST00000355274 422 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 RNU6-741P-201ENST00000383889 107 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 RNA5SP111-201ENST00000411386 101 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 AL353678.1-201ENST00000422735 741 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 NDUFA5P4-201ENST00000436704 385 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 MRPL50P4-201ENST00000446432 475 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 DYNLL1P5-201ENST00000467158 270 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 HIGD1AP13-201ENST00000509878 289 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 RNU6-1038P-201ENST00000516516 104 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 RNA5SP471-201ENST00000516971 106 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 IGKV2-38-201ENST00000517443 247 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 AC005868.1-201ENST00000536421 331 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 AC007458.1-201ENST00000542812 373 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 AC011611.1-201ENST00000552179 197 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 MIR4472-2-201ENST00000582069 67 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 MIR6868-201ENST00000611215 58 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 MIR7151-201ENST00000617477 60 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 TPTEP1-208ENST00000636884 213 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 AC112487.2-201ENST00000637950 304 ntBASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC85CA6NKD9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms