Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gm3404Q9D506 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.26■□□□□ 0.35
Gm3404Q9D506 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3404Q9D506 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Gm10052-201ENSMUST00000168019 960 ntBASIC17.25■□□□□ 0.35
Gm3404Q9D506 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Gm21362-201ENSMUST00000194272 928 ntBASIC17.25■□□□□ 0.35
Gm3404Q9D506 Gm7729-201ENSMUST00000050143 801 ntBASIC17.25■□□□□ 0.35
Gm3404Q9D506 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Gm3404Q9D506 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.24■□□□□ 0.35
Gm3404Q9D506 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3404Q9D506 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3404Q9D506 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3404Q9D506 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3404Q9D506 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3404Q9D506 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3404Q9D506 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3404Q9D506 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Gm3404Q9D506 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3404Q9D506 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Gm3404Q9D506 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3404Q9D506 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm3404Q9D506 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.22■□□□□ 0.35
Gm3404Q9D506 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm3404Q9D506 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms