Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Gm18856-201ENSMUST00000178096 1374 ntBASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Sec61bQ9CQS8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Sec61bQ9CQS8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Gm18206-201ENSMUST00000207027 926 ntBASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 CT009754.4-201ENSMUST00000221430 565 ntBASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Sec61bQ9CQS8 Gfra2-202ENSMUST00000227633 1480 ntBASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Gm2651-201ENSMUST00000203560 838 ntBASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Sec61bQ9CQS8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms