Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Lysmd3Q99LE3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Lysmd3Q99LE3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Birc2-201ENSMUST00000054878 378 ntBASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lysmd3Q99LE3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Gm44454-201ENSMUST00000198541 138 ntBASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lysmd3Q99LE3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Gm15165-201ENSMUST00000118140 502 ntBASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Gm27867-201ENSMUST00000184778 125 ntBASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lysmd3Q99LE3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Gm12644-201ENSMUST00000119935 606 ntBASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lysmd3Q99LE3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms