Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Gm10517-202ENSMUST00000192970 758 ntBASIC16.41■□□□□ 0.22
Cdk9Q99J95 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdk9Q99J95 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.4■□□□□ 0.22
Cdk9Q99J95 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdk9Q99J95 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cdk9Q99J95 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Gm12382-201ENSMUST00000122005 922 ntBASIC16.39■□□□□ 0.21
Cdk9Q99J95 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.39■□□□□ 0.21
Cdk9Q99J95 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdk9Q99J95 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdk9Q99J95 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms