Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Mir5131-201ENSMUST00000175426 93 ntBASIC18.69■□□□□ 0.58
Smc1bQ920F6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Smc1bQ920F6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc1bQ920F6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.67■□□□□ 0.58
Smc1bQ920F6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.67■□□□□ 0.58
Smc1bQ920F6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Gm6296-201ENSMUST00000222599 943 ntBASIC18.67■□□□□ 0.58
Smc1bQ920F6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.67■□□□□ 0.58
Smc1bQ920F6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.67■□□□□ 0.58
Smc1bQ920F6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc1bQ920F6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.66■□□□□ 0.58
Smc1bQ920F6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.66■□□□□ 0.58
Smc1bQ920F6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc1bQ920F6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.65■□□□□ 0.58
Smc1bQ920F6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms