Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Gm10698-201ENSMUST00000182663 604 ntBASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh18Q8VHR0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Gm10653-202ENSMUST00000139570 835 ntBASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh18Q8VHR0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh18Q8VHR0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms