Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm44357-201ENSMUST00000195897 142 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm19658-201ENSMUST00000196231 138 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm44367-201ENSMUST00000196836 138 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm44350-201ENSMUST00000197197 138 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm44390-201ENSMUST00000197533 144 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm44313-201ENSMUST00000198018 138 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm44486-201ENSMUST00000198508 138 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm44314-201ENSMUST00000199263 138 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm44394-201ENSMUST00000199558 138 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm44484-201ENSMUST00000199873 138 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm44466-201ENSMUST00000200264 138 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm44359-201ENSMUST00000200671 138 ntBASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp2a1Q8R429 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Gm7862-201ENSMUST00000121461 292 ntBASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp2a1Q8R429 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Gm6376-201ENSMUST00000209407 580 ntBASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp2a1Q8R429 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Atp2a1Q8R429 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atp2a1Q8R429 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atp2a1Q8R429 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atp2a1Q8R429 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Atp2a1Q8R429 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atp2a1Q8R429 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Atp2a1Q8R429 Gm36967-201ENSMUST00000193814 266 ntBASIC18.08■□□□□ 0.48
Atp2a1Q8R429 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atp2a1Q8R429 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.08■□□□□ 0.48
Atp2a1Q8R429 AW822252-206ENSMUST00000208904 237 ntBASIC18.08■□□□□ 0.48
Atp2a1Q8R429 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Atp2a1Q8R429 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.08■□□□□ 0.48
Atp2a1Q8R429 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atp2a1Q8R429 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atp2a1Q8R429 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms