Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cystm1Q8K353 Gm8309-201ENSMUST00000206627 1448 ntBASIC10.24□□□□□ -0.77
Cystm1Q8K353 Nrn1-203ENSMUST00000223611 1443 ntBASIC10.24□□□□□ -0.77
Cystm1Q8K353 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC10.24□□□□□ -0.77
Cystm1Q8K353 H2-K2-201ENSMUST00000174250 1049 ntBASIC10.24□□□□□ -0.77
Cystm1Q8K353 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.24□□□□□ -0.77
Cystm1Q8K353 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cystm1Q8K353 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Gm13181-201ENSMUST00000120117 1069 ntBASIC10.23□□□□□ -0.77
Cystm1Q8K353 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC10.23□□□□□ -0.77
Cystm1Q8K353 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cystm1Q8K353 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cystm1Q8K353 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms