Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.34■□□□□ 0.53
Syne4Q8CII8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.34■□□□□ 0.53
Syne4Q8CII8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.34■□□□□ 0.53
Syne4Q8CII8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.34■□□□□ 0.53
Syne4Q8CII8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syne4Q8CII8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syne4Q8CII8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syne4Q8CII8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Syne4Q8CII8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.33■□□□□ 0.52
Syne4Q8CII8 Gm17271-201ENSMUST00000165535 355 ntBASIC18.33■□□□□ 0.52
Syne4Q8CII8 Gm45167-201ENSMUST00000208007 322 ntBASIC18.33■□□□□ 0.52
Syne4Q8CII8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.33■□□□□ 0.52
Syne4Q8CII8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne4Q8CII8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne4Q8CII8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne4Q8CII8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne4Q8CII8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne4Q8CII8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Gm14701-201ENSMUST00000117156 348 ntBASIC18.32■□□□□ 0.52
Syne4Q8CII8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne4Q8CII8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syne4Q8CII8 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.31■□□□□ 0.52
Syne4Q8CII8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne4Q8CII8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne4Q8CII8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.31■□□□□ 0.52
Syne4Q8CII8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne4Q8CII8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne4Q8CII8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.31■□□□□ 0.52
Syne4Q8CII8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne4Q8CII8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne4Q8CII8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne4Q8CII8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syne4Q8CII8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syne4Q8CII8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Syne4Q8CII8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.3■□□□□ 0.52
Syne4Q8CII8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syne4Q8CII8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms