Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rp1l1Q8CGM2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rp1l1Q8CGM2 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.77■□□□□ 0.28
Rp1l1Q8CGM2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rp1l1Q8CGM2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rp1l1Q8CGM2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rp1l1Q8CGM2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.77■□□□□ 0.28
Rp1l1Q8CGM2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rp1l1Q8CGM2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rp1l1Q8CGM2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.77■□□□□ 0.27
Rp1l1Q8CGM2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.77■□□□□ 0.27
Rp1l1Q8CGM2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rp1l1Q8CGM2 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.77■□□□□ 0.27
Rp1l1Q8CGM2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Rp1l1Q8CGM2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rp1l1Q8CGM2 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.77■□□□□ 0.27
Rp1l1Q8CGM2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rp1l1Q8CGM2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rp1l1Q8CGM2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rp1l1Q8CGM2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Gm11424-201ENSMUST00000121929 829 ntBASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Gm20553-201ENSMUST00000204205 844 ntBASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.76■□□□□ 0.27
Rp1l1Q8CGM2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Rprl2-201ENSMUST00000157150 290 ntBASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Gm18246-201ENSMUST00000221023 728 ntBASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rp1l1Q8CGM2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Gm18489-201ENSMUST00000172565 551 ntBASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Thap2-203ENSMUST00000218989 527 ntBASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rp1l1Q8CGM2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms