Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Il3ra-202ENSMUST00000223589 738 ntBASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps9d1Q8C190 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.24■□□□□ 0.03
Vps9d1Q8C190 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vps9d1Q8C190 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps9d1Q8C190 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms