Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Gm22697-201ENSMUST00000175194 63 ntBASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Gm10566-201ENSMUST00000086739 996 ntBASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trerf1Q8BXJ2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trerf1Q8BXJ2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trerf1Q8BXJ2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trerf1Q8BXJ2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trerf1Q8BXJ2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trerf1Q8BXJ2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Mir1668-201ENSMUST00000184114 107 ntBASIC17.11■□□□□ 0.33
Trerf1Q8BXJ2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms