Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smco3Q8BQM7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Gm15375-201ENSMUST00000119510 849 ntBASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Rab3c-203ENSMUST00000224180 967 ntBASIC13.43□□□□□ -0.26
Smco3Q8BQM7 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smco3Q8BQM7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Gm26524-201ENSMUST00000192339 390 ntBASIC13.42□□□□□ -0.26
Smco3Q8BQM7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smco3Q8BQM7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Gm4968-201ENSMUST00000071458 858 ntBASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smco3Q8BQM7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.41□□□□□ -0.26
Smco3Q8BQM7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms