Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.7■□□□□ 0.58
Prpf40bQ80W14 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Mir5126-201ENSMUST00000175513 77 ntBASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf40bQ80W14 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf40bQ80W14 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Gm13312-201ENSMUST00000119631 718 ntBASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Psmb5-202ENSMUST00000227257 622 ntBASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf40bQ80W14 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Phf7-203ENSMUST00000226565 1971 ntBASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf40bQ80W14 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Gm13186-201ENSMUST00000118031 316 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms