Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf220Q6PDX6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf220Q6PDX6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf220Q6PDX6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf220Q6PDX6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf220Q6PDX6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf220Q6PDX6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf220Q6PDX6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Rnf220Q6PDX6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
Rnf220Q6PDX6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf220Q6PDX6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf220Q6PDX6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf220Q6PDX6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Mir6349-201ENSMUST00000184059 97 ntBASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf220Q6PDX6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.42■□□□□ 0.06
Rnf220Q6PDX6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf220Q6PDX6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.42■□□□□ 0.06
Rnf220Q6PDX6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms