Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sdf4Q61112 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sdf4Q61112 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sdf4Q61112 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Sdf4Q61112 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sdf4Q61112 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.48■□□□□ 0.23
Sdf4Q61112 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sdf4Q61112 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.47■□□□□ 0.23
Sdf4Q61112 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sdf4Q61112 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sdf4Q61112 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.47■□□□□ 0.23
Sdf4Q61112 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sdf4Q61112 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.47■□□□□ 0.23
Sdf4Q61112 Gm17808-201ENSMUST00000200859 894 ntBASIC16.47■□□□□ 0.23
Sdf4Q61112 Gm44430-201ENSMUST00000203376 995 ntBASIC16.47■□□□□ 0.23
Sdf4Q61112 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sdf4Q61112 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sdf4Q61112 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sdf4Q61112 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Sdf4Q61112 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.46■□□□□ 0.23
Sdf4Q61112 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Sdf4Q61112 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Sdf4Q61112 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Sdf4Q61112 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Sdf4Q61112 Gm6345-202ENSMUST00000180900 204 ntBASIC16.46■□□□□ 0.23
Sdf4Q61112 Gm29518-201ENSMUST00000190858 372 ntBASIC16.46■□□□□ 0.23
Sdf4Q61112 Gm45328-201ENSMUST00000210942 917 ntBASIC16.46■□□□□ 0.23
Sdf4Q61112 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.46■□□□□ 0.23
Sdf4Q61112 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Sdf4Q61112 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sdf4Q61112 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sdf4Q61112 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sdf4Q61112 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sdf4Q61112 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sdf4Q61112 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Sdf4Q61112 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdf4Q61112 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.45■□□□□ 0.22
Sdf4Q61112 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Sdf4Q61112 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Sdf4Q61112 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdf4Q61112 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms