Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav2Q5R1I9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav2Q5R1I9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav2Q5R1I9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav2Q5R1I9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav2Q5R1I9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav2Q5R1I9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav2Q5R1I9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav2Q5R1I9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav2Q5R1I9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Birc2-201ENSMUST00000054878 378 ntBASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav2Q5R1I9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms