Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Scarf1Q5ND28 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scarf1Q5ND28 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.77■□□□□ 0.43
Scarf1Q5ND28 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scarf1Q5ND28 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Scarf1Q5ND28 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.76■□□□□ 0.43
Scarf1Q5ND28 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarf1Q5ND28 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Gm42660-201ENSMUST00000197733 947 ntBASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scarf1Q5ND28 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Gm15372-201ENSMUST00000120729 834 ntBASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Gm27867-201ENSMUST00000184778 125 ntBASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Gm17971-201ENSMUST00000190239 806 ntBASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Gm44454-201ENSMUST00000198541 138 ntBASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarf1Q5ND28 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.73■□□□□ 0.43
Scarf1Q5ND28 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.73■□□□□ 0.43
Scarf1Q5ND28 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarf1Q5ND28 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms