Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Gm38027-201ENSMUST00000192315 235 ntBASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Timm23-208ENSMUST00000226683 750 ntBASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ptchd3Q0EEE2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Gm37025-201ENSMUST00000195159 829 ntBASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ptchd3Q0EEE2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ptchd3Q0EEE2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Ptchd3Q0EEE2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.71■□□□□ 0.1
Ptchd3Q0EEE2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ptchd3Q0EEE2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ptchd3Q0EEE2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms