Protein–RNA interactions for Protein: P83917

Cbx1, Chromobox protein homolog 1, mousemouse

Known RBP Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx1P83917 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx1P83917 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cbx1P83917 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx1P83917 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cbx1P83917 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cbx1P83917 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Cbx1P83917 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 BC037039-201ENSMUST00000192003 2205 ntBASIC17.39■□□□□ 0.37
Cbx1P83917 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cbx1P83917 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.39■□□□□ 0.37
Cbx1P83917 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.39■□□□□ 0.37
Cbx1P83917 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Cbx1P83917 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cbx1P83917 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Cbx1P83917 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.39■□□□□ 0.37
Cbx1P83917 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx1P83917 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cbx1P83917 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.38■□□□□ 0.37
Cbx1P83917 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.38■□□□□ 0.37
Cbx1P83917 Gm38205-201ENSMUST00000192243 258 ntBASIC17.38■□□□□ 0.37
Cbx1P83917 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx1P83917 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Cbx1P83917 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.37■□□□□ 0.37
Cbx1P83917 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.37■□□□□ 0.37
Cbx1P83917 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.37■□□□□ 0.37
Cbx1P83917 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.37■□□□□ 0.37
Cbx1P83917 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.37■□□□□ 0.37
Cbx1P83917 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx1P83917 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cbx1P83917 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.36■□□□□ 0.37
Cbx1P83917 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
Cbx1P83917 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cbx1P83917 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cbx1P83917 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx1P83917 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.36■□□□□ 0.37
Cbx1P83917 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cbx1P83917 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cbx1P83917 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms