Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC9.68□□□□□ -0.86
Rps28P62858 Gm44729-201ENSMUST00000206759 2052 ntBASIC9.68□□□□□ -0.86
Rps28P62858 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC9.68□□□□□ -0.86
Rps28P62858 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC9.68□□□□□ -0.86
Rps28P62858 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Rps28P62858 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rps28P62858 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rps28P62858 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC9.67□□□□□ -0.86
Rps28P62858 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Rps28P62858 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Rps28P62858 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC9.67□□□□□ -0.86
Rps28P62858 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rps28P62858 AC117194.1-201ENSMUST00000224847 3002 ntBASIC9.67□□□□□ -0.86
Rps28P62858 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.67□□□□□ -0.86
Rps28P62858 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Gm6198-201ENSMUST00000191337 2929 ntBASIC9.67□□□□□ -0.86
Rps28P62858 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC9.67□□□□□ -0.86
Rps28P62858 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 Mmp14-206ENSMUST00000225641 3238 ntBASIC9.67□□□□□ -0.86
Rps28P62858 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rps28P62858 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rps28P62858 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Rps28P62858 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC9.66□□□□□ -0.86
Rps28P62858 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.66□□□□□ -0.86
Rps28P62858 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Rps28P62858 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC9.66□□□□□ -0.86
Rps28P62858 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.66□□□□□ -0.86
Rps28P62858 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Rps28P62858 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Rps28P62858 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Rps28P62858 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC9.66□□□□□ -0.86
Rps28P62858 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rps28P62858 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Rps28P62858 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC9.65□□□□□ -0.86
Rps28P62858 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rps28P62858 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms