Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lbx1P52955 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lbx1P52955 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lbx1P52955 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lbx1P52955 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.68■□□□□ 0.1
Lbx1P52955 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lbx1P52955 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lbx1P52955 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lbx1P52955 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.67■□□□□ 0.1
Lbx1P52955 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.67■□□□□ 0.1
Lbx1P52955 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.67■□□□□ 0.1
Lbx1P52955 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.67■□□□□ 0.1
Lbx1P52955 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Lbx1P52955 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lbx1P52955 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lbx1P52955 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lbx1P52955 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lbx1P52955 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lbx1P52955 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lbx1P52955 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lbx1P52955 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.66■□□□□ 0.1
Lbx1P52955 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lbx1P52955 Gm18889-201ENSMUST00000174284 929 ntBASIC15.66■□□□□ 0.1
Lbx1P52955 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lbx1P52955 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.66■□□□□ 0.1
Lbx1P52955 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.66■□□□□ 0.1
Lbx1P52955 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Lbx1P52955 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.66■□□□□ 0.1
Lbx1P52955 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lbx1P52955 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lbx1P52955 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lbx1P52955 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lbx1P52955 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lbx1P52955 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.66■□□□□ 0.1
Lbx1P52955 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lbx1P52955 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Gm15427-201ENSMUST00000117288 531 ntBASIC15.65■□□□□ 0.1
Lbx1P52955 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.65■□□□□ 0.1
Lbx1P52955 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.65■□□□□ 0.1
Lbx1P52955 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Lbx1P52955 Gm4899-201ENSMUST00000178708 719 ntBASIC15.65■□□□□ 0.1
Lbx1P52955 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.65■□□□□ 0.1
Lbx1P52955 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Lbx1P52955 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.65■□□□□ 0.1
Lbx1P52955 Gm18062-201ENSMUST00000208020 547 ntBASIC15.65■□□□□ 0.1
Lbx1P52955 Gm18055-201ENSMUST00000208254 547 ntBASIC15.65■□□□□ 0.1
Lbx1P52955 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.65■□□□□ 0.1
Lbx1P52955 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.65■□□□□ 0.1
Lbx1P52955 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.65■□□□□ 0.1
Lbx1P52955 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lbx1P52955 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lbx1P52955 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lbx1P52955 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lbx1P52955 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lbx1P52955 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.64■□□□□ 0.09
Lbx1P52955 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lbx1P52955 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.64■□□□□ 0.09
Lbx1P52955 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.64■□□□□ 0.09
Lbx1P52955 Rprl2-201ENSMUST00000157150 290 ntBASIC15.64■□□□□ 0.09
Lbx1P52955 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lbx1P52955 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lbx1P52955 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.64■□□□□ 0.09
Lbx1P52955 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.64■□□□□ 0.09
Lbx1P52955 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lbx1P52955 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.64■□□□□ 0.09
Lbx1P52955 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.64■□□□□ 0.09
Lbx1P52955 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lbx1P52955 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lbx1P52955 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lbx1P52955 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Lbx1P52955 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms