Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Brca1P48754 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brca1P48754 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.15■□□□□ 0.5
Brca1P48754 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brca1P48754 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brca1P48754 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Brca1P48754 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Brca1P48754 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Brca1P48754 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.15■□□□□ 0.5
Brca1P48754 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brca1P48754 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.15■□□□□ 0.5
Brca1P48754 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brca1P48754 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Brca1P48754 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Brca1P48754 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brca1P48754 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Brca1P48754 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brca1P48754 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brca1P48754 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Brca1P48754 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Brca1P48754 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Brca1P48754 Gm25948-201ENSMUST00000175334 112 ntBASIC18.14■□□□□ 0.5
Brca1P48754 Gm4899-201ENSMUST00000178708 719 ntBASIC18.14■□□□□ 0.5
Brca1P48754 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.14■□□□□ 0.5
Brca1P48754 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Brca1P48754 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Brca1P48754 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Brca1P48754 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Brca1P48754 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Brca1P48754 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brca1P48754 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Brca1P48754 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.14■□□□□ 0.49
Brca1P48754 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brca1P48754 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brca1P48754 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brca1P48754 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Brca1P48754 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.14■□□□□ 0.49
Brca1P48754 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.14■□□□□ 0.49
Brca1P48754 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.14■□□□□ 0.49
Brca1P48754 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Brca1P48754 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brca1P48754 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.13■□□□□ 0.49
Brca1P48754 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Brca1P48754 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.13■□□□□ 0.49
Brca1P48754 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.13■□□□□ 0.49
Brca1P48754 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brca1P48754 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brca1P48754 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brca1P48754 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brca1P48754 Gm11745-201ENSMUST00000121669 448 ntBASIC18.13■□□□□ 0.49
Brca1P48754 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.13■□□□□ 0.49
Brca1P48754 Gm45167-201ENSMUST00000208007 322 ntBASIC18.13■□□□□ 0.49
Brca1P48754 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brca1P48754 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Brca1P48754 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Brca1P48754 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.12■□□□□ 0.49
Brca1P48754 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.12■□□□□ 0.49
Brca1P48754 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.12■□□□□ 0.49
Brca1P48754 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Brca1P48754 Gm12428-201ENSMUST00000119844 727 ntBASIC18.12■□□□□ 0.49
Brca1P48754 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.12■□□□□ 0.49
Brca1P48754 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Brca1P48754 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Brca1P48754 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.11■□□□□ 0.49
Brca1P48754 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Brca1P48754 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Brca1P48754 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.11■□□□□ 0.49
Brca1P48754 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Brca1P48754 Mir6990-201ENSMUST00000183724 91 ntBASIC18.11■□□□□ 0.49
Brca1P48754 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.11■□□□□ 0.49
Brca1P48754 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.11■□□□□ 0.49
Brca1P48754 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Brca1P48754 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms