Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC21.59■■□□□ 1.05
Col18a1P39061 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Col18a1P39061 AC131710.1-201ENSMUST00000228336 990 ntBASIC21.59■■□□□ 1.05
Col18a1P39061 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Col18a1P39061 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC21.59■■□□□ 1.05
Col18a1P39061 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Gm16198-201ENSMUST00000118766 670 ntBASIC21.59■■□□□ 1.05
Col18a1P39061 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC21.59■■□□□ 1.05
Col18a1P39061 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col18a1P39061 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC21.58■■□□□ 1.05
Col18a1P39061 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col18a1P39061 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col18a1P39061 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col18a1P39061 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col18a1P39061 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col18a1P39061 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC21.58■■□□□ 1.04
Col18a1P39061 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC21.58■■□□□ 1.04
Col18a1P39061 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Col18a1P39061 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC21.58■■□□□ 1.04
Col18a1P39061 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC21.58■■□□□ 1.04
Col18a1P39061 Rbfox2-208ENSMUST00000227930 1218 ntBASIC21.58■■□□□ 1.04
Col18a1P39061 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Col18a1P39061 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col18a1P39061 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col18a1P39061 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col18a1P39061 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col18a1P39061 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col18a1P39061 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col18a1P39061 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Col18a1P39061 Gm13823-201ENSMUST00000119930 345 ntBASIC21.57■■□□□ 1.04
Col18a1P39061 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Col18a1P39061 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC21.57■■□□□ 1.04
Col18a1P39061 Gm38294-201ENSMUST00000192831 381 ntBASIC21.57■■□□□ 1.04
Col18a1P39061 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col18a1P39061 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col18a1P39061 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col18a1P39061 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col18a1P39061 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC21.56■■□□□ 1.04
Col18a1P39061 Gm12008-201ENSMUST00000117791 755 ntBASIC21.56■■□□□ 1.04
Col18a1P39061 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC21.56■■□□□ 1.04
Col18a1P39061 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 AC151836.1-202ENSMUST00000226259 753 ntBASIC21.56■■□□□ 1.04
Col18a1P39061 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Col18a1P39061 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Col18a1P39061 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 AC159621.2-201ENSMUST00000223519 1326 ntBASIC21.56■■□□□ 1.04
Col18a1P39061 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 AC122024.2-201ENSMUST00000220086 871 ntBASIC21.56■■□□□ 1.04
Col18a1P39061 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col18a1P39061 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Col18a1P39061 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col18a1P39061 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col18a1P39061 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col18a1P39061 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col18a1P39061 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Col18a1P39061 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Col18a1P39061 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC21.55■■□□□ 1.04
Col18a1P39061 Gtpbp10-211ENSMUST00000198799 648 ntBASIC21.55■■□□□ 1.04
Col18a1P39061 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC21.55■■□□□ 1.04
Col18a1P39061 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col18a1P39061 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC21.55■■□□□ 1.04
Col18a1P39061 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Col18a1P39061 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col18a1P39061 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col18a1P39061 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col18a1P39061 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col18a1P39061 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Col18a1P39061 Gm6018-201ENSMUST00000216090 1306 ntBASIC21.54■■□□□ 1.04
Col18a1P39061 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col18a1P39061 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col18a1P39061 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col18a1P39061 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Col18a1P39061 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col18a1P39061 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Col18a1P39061 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col18a1P39061 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC21.54■■□□□ 1.04
Col18a1P39061 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col18a1P39061 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col18a1P39061 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col18a1P39061 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col18a1P39061 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Col18a1P39061 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms