Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cops4O88544 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cops4O88544 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cops4O88544 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cops4O88544 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cops4O88544 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cops4O88544 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cops4O88544 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cops4O88544 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.04■□□□□ -0
Cops4O88544 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Gm29257-201ENSMUST00000186115 639 ntBASIC15.04■□□□□ -0
Cops4O88544 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.04■□□□□ -0
Cops4O88544 Gm43183-201ENSMUST00000200632 547 ntBASIC15.04■□□□□ -0
Cops4O88544 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.04■□□□□ -0
Cops4O88544 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cops4O88544 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops4O88544 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Cops4O88544 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Cops4O88544 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.03■□□□□ -0
Cops4O88544 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Cops4O88544 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.03■□□□□ -0
Cops4O88544 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cops4O88544 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cops4O88544 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.03■□□□□ -0
Cops4O88544 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.03■□□□□ -0
Cops4O88544 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.03■□□□□ -0
Cops4O88544 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cops4O88544 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cops4O88544 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cops4O88544 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops4O88544 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops4O88544 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cops4O88544 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops4O88544 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cops4O88544 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cops4O88544 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.02■□□□□ -0
Cops4O88544 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Cops4O88544 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.02■□□□□ -0
Cops4O88544 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops4O88544 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cops4O88544 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.02■□□□□ -0
Cops4O88544 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.02■□□□□ -0
Cops4O88544 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cops4O88544 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops4O88544 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cops4O88544 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops4O88544 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops4O88544 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops4O88544 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Cops4O88544 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.01□□□□□ -0.01
Cops4O88544 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cops4O88544 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.01□□□□□ -0.01
Cops4O88544 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms