Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm8825-201ENSMUST00000182565 998 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm4518-201ENSMUST00000182638 718 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm27397-201ENSMUST00000184997 107 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trdmt1O55055 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.85■□□□□ 0.45
Trdmt1O55055 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trdmt1O55055 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trdmt1O55055 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Trdmt1O55055 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.84■□□□□ 0.45
Trdmt1O55055 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Gm11764-201ENSMUST00000120221 623 ntBASIC17.84■□□□□ 0.45
Trdmt1O55055 Gm5682-201ENSMUST00000173402 505 ntBASIC17.84■□□□□ 0.45
Trdmt1O55055 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.84■□□□□ 0.45
Trdmt1O55055 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.84■□□□□ 0.45
Trdmt1O55055 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trdmt1O55055 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdmt1O55055 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Trdmt1O55055 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.83■□□□□ 0.45
Trdmt1O55055 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trdmt1O55055 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trdmt1O55055 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trdmt1O55055 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trdmt1O55055 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trdmt1O55055 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.83■□□□□ 0.44
Trdmt1O55055 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Trdmt1O55055 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.83■□□□□ 0.44
Trdmt1O55055 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trdmt1O55055 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trdmt1O55055 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trdmt1O55055 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trdmt1O55055 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.83■□□□□ 0.44
Trdmt1O55055 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trdmt1O55055 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trdmt1O55055 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trdmt1O55055 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trdmt1O55055 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.82■□□□□ 0.44
Trdmt1O55055 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trdmt1O55055 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trdmt1O55055 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.82■□□□□ 0.44
Trdmt1O55055 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trdmt1O55055 Gm14822-201ENSMUST00000122247 291 ntBASIC17.82■□□□□ 0.44
Trdmt1O55055 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.82■□□□□ 0.44
Trdmt1O55055 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.82■□□□□ 0.44
Trdmt1O55055 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trdmt1O55055 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trdmt1O55055 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trdmt1O55055 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.82■□□□□ 0.44
Trdmt1O55055 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trdmt1O55055 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trdmt1O55055 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.81■□□□□ 0.44
Trdmt1O55055 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.81■□□□□ 0.44
Trdmt1O55055 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trdmt1O55055 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.81■□□□□ 0.44
Trdmt1O55055 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.81■□□□□ 0.44
Trdmt1O55055 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Gm10175-201ENSMUST00000086013 645 ntBASIC17.81■□□□□ 0.44
Trdmt1O55055 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trdmt1O55055 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms