Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cxcl13O55038 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.72□□□□□ -0.21
Cxcl13O55038 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.71□□□□□ -0.21
Cxcl13O55038 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Cxcl13O55038 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.71□□□□□ -0.21
Cxcl13O55038 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.71□□□□□ -0.21
Cxcl13O55038 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.71□□□□□ -0.21
Cxcl13O55038 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cxcl13O55038 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl13O55038 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cxcl13O55038 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cxcl13O55038 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cxcl13O55038 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cxcl13O55038 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
Cxcl13O55038 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cxcl13O55038 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cxcl13O55038 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cxcl13O55038 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cxcl13O55038 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Cxcl13O55038 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 Gm12497-201ENSMUST00000138778 237 ntBASIC13.7□□□□□ -0.22
Cxcl13O55038 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.7□□□□□ -0.22
Cxcl13O55038 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.7□□□□□ -0.22
Cxcl13O55038 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Cxcl13O55038 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl13O55038 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.69□□□□□ -0.22
Cxcl13O55038 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Cxcl13O55038 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Gm25406-201ENSMUST00000157599 105 ntBASIC13.69□□□□□ -0.22
Cxcl13O55038 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.69□□□□□ -0.22
Cxcl13O55038 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Cxcl13O55038 Gm9172-201ENSMUST00000212092 954 ntBASIC13.69□□□□□ -0.22
Cxcl13O55038 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.69□□□□□ -0.22
Cxcl13O55038 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.69□□□□□ -0.22
Cxcl13O55038 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cxcl13O55038 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.69□□□□□ -0.22
Cxcl13O55038 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.69□□□□□ -0.22
Cxcl13O55038 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl13O55038 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cxcl13O55038 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl13O55038 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.68□□□□□ -0.22
Cxcl13O55038 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms