Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stx1aO35526 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Stx1aO35526 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stx1aO35526 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stx1aO35526 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stx1aO35526 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stx1aO35526 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.29■□□□□ 0.52
Stx1aO35526 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.29■□□□□ 0.52
Stx1aO35526 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.29■□□□□ 0.52
Stx1aO35526 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Stx1aO35526 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.29■□□□□ 0.52
Stx1aO35526 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stx1aO35526 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stx1aO35526 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Stx1aO35526 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stx1aO35526 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stx1aO35526 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Stx1aO35526 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.28■□□□□ 0.52
Stx1aO35526 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Stx1aO35526 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.28■□□□□ 0.52
Stx1aO35526 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stx1aO35526 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stx1aO35526 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Stx1aO35526 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Stx1aO35526 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stx1aO35526 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stx1aO35526 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Stx1aO35526 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stx1aO35526 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.27■□□□□ 0.52
Stx1aO35526 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stx1aO35526 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stx1aO35526 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Stx1aO35526 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.27■□□□□ 0.52
Stx1aO35526 Gm18115-201ENSMUST00000221209 621 ntBASIC18.27■□□□□ 0.52
Stx1aO35526 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.27■□□□□ 0.52
Stx1aO35526 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Stx1aO35526 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stx1aO35526 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Stx1aO35526 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Stx1aO35526 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Stx1aO35526 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Stx1aO35526 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Stx1aO35526 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Stx1aO35526 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Stx1aO35526 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Stx1aO35526 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Stx1aO35526 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.26■□□□□ 0.51
Stx1aO35526 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Stx1aO35526 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.26■□□□□ 0.51
Stx1aO35526 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Stx1aO35526 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Stx1aO35526 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.26■□□□□ 0.51
Stx1aO35526 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.26■□□□□ 0.51
Stx1aO35526 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.26■□□□□ 0.51
Stx1aO35526 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Stx1aO35526 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Stx1aO35526 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.25■□□□□ 0.51
Stx1aO35526 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.25■□□□□ 0.51
Stx1aO35526 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.25■□□□□ 0.51
Stx1aO35526 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Stx1aO35526 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Stx1aO35526 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms