Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Gm11025-201ENSMUST00000140773 466 ntBASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
B020004C17RikJ3QP07 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
B020004C17RikJ3QP07 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
B020004C17RikJ3QP07 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.08■□□□□ 0.49
B020004C17RikJ3QP07 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
B020004C17RikJ3QP07 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
B020004C17RikJ3QP07 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
B020004C17RikJ3QP07 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Gm17271-201ENSMUST00000165535 355 ntBASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
B020004C17RikJ3QP07 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Gm7063-201ENSMUST00000186840 981 ntBASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
B020004C17RikJ3QP07 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
B020004C17RikJ3QP07 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms