Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gm10566-201ENSMUST00000086739 996 ntBASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcna-ps2A0A140T8V5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcna-ps2A0A140T8V5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcna-ps2A0A140T8V5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcna-ps2A0A140T8V5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcna-ps2A0A140T8V5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcna-ps2A0A140T8V5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcna-ps2A0A140T8V5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcna-ps2A0A140T8V5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcna-ps2A0A140T8V5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Pcna-ps2A0A140T8V5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.33■□□□□ 0.21
Pcna-ps2A0A140T8V5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcna-ps2A0A140T8V5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcna-ps2A0A140T8V5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcna-ps2A0A140T8V5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcna-ps2A0A140T8V5 Gm22697-201ENSMUST00000175194 63 ntBASIC16.33■□□□□ 0.2
Pcna-ps2A0A140T8V5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcna-ps2A0A140T8V5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcna-ps2A0A140T8V5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcna-ps2A0A140T8V5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcna-ps2A0A140T8V5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms