Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv3A0A0A6YYE2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm10517-202ENSMUST00000192970 758 ntBASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 AV356131-201ENSMUST00000206201 750 ntBASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm4968-201ENSMUST00000071458 858 ntBASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv3A0A0A6YYE2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm18025-201ENSMUST00000221733 862 ntBASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv3A0A0A6YYE2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms