Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Prob1-201ENSMUST00000097619 3021 ntBASIC12.11□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Mir1199-201ENSMUST00000117015 119 ntBASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Actl10-202ENSMUST00000226583 1501 ntBASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm10812-201ENSMUST00000099864 546 ntBASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Asic1-205ENSMUST00000228185 1818 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms