Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 App-207ENSMUST00000227737 2827 ntBASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm7638-201ENSMUST00000121348 967 ntBASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-5A0A075B6B9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-5A0A075B6B9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.15□□□□□ -0.31
Trav6d-5A0A075B6B9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6d-5A0A075B6B9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6d-5A0A075B6B9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm18666-201ENSMUST00000190039 958 ntBASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-5A0A075B6B9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms