Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Prob1-201ENSMUST00000097619 3021 ntBASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Gm5643-201ENSMUST00000117081 966 ntBASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Gm37856-201ENSMUST00000191634 999 ntBASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv1A0A075B657 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trdv1A0A075B657 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.4□□□□□ -0.43
Trdv1A0A075B657 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trdv1A0A075B657 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trdv1A0A075B657 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trdv1A0A075B657 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv1A0A075B657 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trdv1A0A075B657 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv1A0A075B657 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trdv1A0A075B657 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv1A0A075B657 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms