Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Trav12-3A0A075B648 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12-3A0A075B648 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.9□□□□□ -0.51
Trav12-3A0A075B648 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Trav12-3A0A075B648 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12-3A0A075B648 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12-3A0A075B648 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12-3A0A075B648 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12-3A0A075B648 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Gm13146-201ENSMUST00000118508 780 ntBASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav12-3A0A075B648 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Gm42501-201ENSMUST00000200220 1026 ntBASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-3A0A075B648 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms