Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm43347-201ENSMUST00000200226 580 ntBASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav5-1A0A075B5Z7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5-1A0A075B5Z7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm34391-201ENSMUST00000203706 907 ntBASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5-1A0A075B5Z7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm27459-201ENSMUST00000184860 107 ntBASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5-1A0A075B5Z7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trav5-1A0A075B5Z7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms