Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 FAM35BP-202ENST00000497389 3337 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 ZNF962P-201ENST00000443465 3140 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AC007785.2-201ENST00000598627 1916 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 Y_RNA.245-201ENST00000364493 95 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-434P-201ENST00000384376 107 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 RNA5SP306-201ENST00000411087 107 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AC091390.3-201ENST00000426478 338 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 ZNF863P-201ENST00000426746 417 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 PMCHL2-203ENST00000457791 237 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 SCARNA18-201ENST00000459004 134 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 Y_RNA.654-201ENST00000497848 106 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 SNORA67.7-201ENST00000516664 135 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 RNA5SP309-201ENST00000516670 106 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-1282P-201ENST00000516735 96 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 TRAV28-201ENST00000557548 323 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 ZNF192P1-203ENST00000565888 810 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AL360157.1-201ENST00000565962 87 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 RPL23AP97-201ENST00000568955 471 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 MIR4429-201ENST00000580105 73 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AL160290.3-201ENST00000604869 165 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 MIR432-201ENST00000606207 94 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 MIR15A-201ENST00000607334 83 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 Z82243.1-201ENST00000609432 473 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AC022306.2-201ENST00000617563 647 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AC007546.1-201ENST00000619452 559 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AC100810.6-201ENST00000638068 285 ntBASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA3Q9Y5H0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AL359693.1-201ENST00000614959 2407 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC007685.1-201ENST00000329806 452 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-767P-201ENST00000384132 107 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-393P-201ENST00000384475 107 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 MIR554-201ENST00000384874 96 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC092809.3-201ENST00000415453 231 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AL451062.2-201ENST00000427515 271 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 HMGB3P22-202ENST00000451823 572 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 HMGN2P26-201ENST00000463169 339 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 RPS23P3-201ENST00000470993 430 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 RN7SL132P-201ENST00000478131 296 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 RNA5SP290-201ENST00000517133 127 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 PSMA2P1-201ENST00000526365 646 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 MIR3158-1-201ENST00000583596 81 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC013553.2-201ENST00000604244 589 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AL161798.1-201ENST00000604630 131 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC022336.2-201ENST00000568966 2538 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AL161912.2-201ENST00000565707 3007 ntBASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA3Q9Y5H0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA3Q9Y5H0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms