Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 RNU6-181P-201ENST00000363225 107 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 RNU6-288P-201ENST00000363690 104 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 RNU6-1103P-201ENST00000384150 107 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 RNU6-456P-201ENST00000384493 107 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 SNORA57.3-201ENST00000411095 141 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC245291.1-201ENST00000419501 328 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC002075.2-201ENST00000425207 252 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AL451062.2-201ENST00000427515 271 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC093106.2-201ENST00000428212 385 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 TBCAP1-201ENST00000436520 327 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 DDX3P2-201ENST00000446138 111 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AL133547.1-201ENST00000448546 220 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC004801.2-202ENST00000463559 283 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 RN7SL542P-201ENST00000467147 294 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC084198.1-201ENST00000477747 402 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC079382.1-201ENST00000493346 557 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC105252.1-201ENST00000503089 286 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 HMGB1P29-201ENST00000505659 499 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC108078.2-201ENST00000510750 236 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 RNU6-445P-201ENST00000516949 107 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 RNU6-1220P-201ENST00000517126 108 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC068135.2-201ENST00000569293 1028 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC005951.1-201ENST00000576706 485 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC012468.1-201ENST00000604888 430 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC107294.3-201ENST00000609211 526 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC006133.1-201ENST00000617106 264 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 AC005609.4-201ENST00000625071 447 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 U2.21-201ENST00000637295 81 ntBASIC3.56□□□□□ -1.84
PCDHGB3Q9Y5G1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 SNORA62.3-201ENST00000365110 153 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC073464.1-201ENST00000429823 534 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC018644.1-201ENST00000429934 551 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AL358934.1-201ENST00000432346 324 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 TPT1P7-201ENST00000458300 517 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC092185.1-201ENST00000491371 97 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AL358832.1-201ENST00000497800 389 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC109927.2-201ENST00000506416 303 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 SNORD27.1-201ENST00000516319 72 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 RNU6-914P-201ENST00000516749 109 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AP003122.3-201ENST00000526316 255 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AP001646.1-201ENST00000527936 915 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC084851.1-201ENST00000529105 249 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 OR4R1P-201ENST00000529879 463 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC006960.3-201ENST00000561845 705 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 MIR4444-1-201ENST00000581696 74 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 MIR4444-2-201ENST00000584390 74 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AL133393.1-201ENST00000603277 287 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC012409.4-201ENST00000612923 249 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 LRRC77P-213ENST00000637727 880 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC092447.7-201ENST00000422212 1621 ntBASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHGB3Q9Y5G1 AP003122.5-201ENST00000527668 3766 ntBASIC3.54□□□□□ -1.84
PCDHGB3Q9Y5G1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGB3Q9Y5G1 RNU6-778P-201ENST00000363269 103 ntBASIC3.54□□□□□ -1.84
PCDHGB3Q9Y5G1 RNU6-884P-201ENST00000363889 107 ntBASIC3.54□□□□□ -1.84
PCDHGB3Q9Y5G1 Y_RNA.318-201ENST00000365131 97 ntBASIC3.54□□□□□ -1.84
PCDHGB3Q9Y5G1 RNU1-73P-201ENST00000383971 164 ntBASIC3.54□□□□□ -1.84
PCDHGB3Q9Y5G1 MIR23B-201ENST00000384832 97 ntBASIC3.54□□□□□ -1.84
PCDHGB3Q9Y5G1 MIR454-201ENST00000390180 115 ntBASIC3.54□□□□□ -1.84
PCDHGB3Q9Y5G1 GSTA9P-201ENST00000406231 611 ntBASIC3.54□□□□□ -1.84
PCDHGB3Q9Y5G1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHGB3Q9Y5G1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms