Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AL590639.1-201ENST00000456484 337 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 snoU13.28-201ENST00000459235 104 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 RPS3AP14-201ENST00000483907 780 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 LARP1BP2-201ENST00000486594 519 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 MTND1P22-201ENST00000510572 951 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 OR5BM1P-201ENST00000512021 366 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AL356432.3-201ENST00000568952 465 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 MTCO3P24-201ENST00000572729 782 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 ROCK1P1-201ENST00000573767 549 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 RPL23AP78-201ENST00000599928 470 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 U73023.1-201ENST00000603134 700 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AC103710.1-201ENST00000610003 901 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AC090970.3-201ENST00000612566 866 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AC073308.1-201ENST00000623696 305 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AC019226.2-201ENST00000625973 424 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
ATG4BQ9Y4P1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 RNU5A-2P-201ENST00000384337 116 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AL049545.1-201ENST00000401856 572 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 MED14P1-201ENST00000430517 648 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC022018.1-201ENST00000430685 241 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AL445567.1-201ENST00000439121 144 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC020550.1-201ENST00000447385 163 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 RPS29P12-201ENST00000460178 152 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC087588.1-201ENST00000462203 316 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AP004217.1-201ENST00000480579 346 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AL160314.1-201ENST00000490836 438 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC114797.1-201ENST00000514003 728 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 RNU6-928P-201ENST00000516876 104 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 RNU6-1003P-201ENST00000517099 105 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC123904.2-201ENST00000548059 300 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC106782.4-201ENST00000568264 210 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 MIR3915-201ENST00000578518 97 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC006504.3-201ENST00000586818 523 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC002545.1-201ENST00000592511 181 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AL391813.2-201ENST00000609113 322 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 SNHG22-203ENST00000617833 660 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AP003399.1-201ENST00000637534 361 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 AC108206.1-201ENST00000570186 4159 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 MAPK10-266ENST00000641066 6555 ntBASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ATG4BQ9Y4P1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 RNU1-105P-201ENST00000363470 161 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 RNU6-1284P-201ENST00000363701 100 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 RNU5A-8P-201ENST00000364102 114 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 SNORA9.2-201ENST00000365361 133 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC099548.1-201ENST00000421443 426 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 ZNF863P-201ENST00000426746 417 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 ARPC3P1-201ENST00000437218 533 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC005094.1-201ENST00000440420 368 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AL590365.1-201ENST00000450788 243 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC108059.3-201ENST00000456388 214 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC010631.1-201ENST00000474150 156 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 RNU6-64P-201ENST00000517119 105 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC106038.2-201ENST00000520706 568 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 DEFB108A-201ENST00000530110 222 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC093012.1-202ENST00000549403 582 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 MRPS36P5-201ENST00000551909 298 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 EIF4BP1-201ENST00000554881 351 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 ZNF519P3-201ENST00000557158 1032 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC135628.1-201ENST00000568867 534 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms