Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 MIR26B-201ENST00000362251 77 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 RNU6-270P-201ENST00000364131 105 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 RPL23AP76-201ENST00000441860 458 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AC004223.1-201ENST00000479840 271 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 RPS15AP36-201ENST00000492022 382 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 RNF138P1-201ENST00000502765 546 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AC108729.3-201ENST00000513484 108 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AP004247.1-201ENST00000531556 1289 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 RRN3P3-201ENST00000549207 578 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 SUB1P3-201ENST00000564581 315 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 CBX3P2-202ENST00000583365 535 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AL078605.1-201ENST00000603529 500 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AL050343.2-201ENST00000607338 280 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AL592148.2-201ENST00000612210 372 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AL157834.3-201ENST00000615543 103 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 AP003476.1-201ENST00000623984 516 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 ZNF209P-201ENST00000593450 2304 ntBASIC0.86□□□□□ -2.27
UBE2D4Q9Y2X8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 RNU6-939P-201ENST00000384634 107 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 SNORA40.6-201ENST00000391153 128 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 RNU6-1197P-201ENST00000391183 107 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 AL035405.1-201ENST00000400795 710 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 PRRC2CP1-201ENST00000404428 159 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 MTND5P25-201ENST00000430499 799 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 HMGB1P31-201ENST00000437242 427 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 RN7SKP210-201ENST00000459176 261 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 AC114801.2-201ENST00000503825 781 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 RNA5SP165-201ENST00000517142 115 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 AC087441.2-201ENST00000529141 262 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 AL161670.1-201ENST00000554348 137 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 MIR3198-2-201ENST00000577868 80 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 MIR3660-201ENST00000584845 100 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 AP001485.1-201ENST00000604799 199 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 AP003400.5-201ENST00000624827 617 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 LINC02211-204ENST00000642024 1070 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 AC099063.3-201ENST00000642066 185 ntBASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
UBE2D4Q9Y2X8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 RNU1-72P-201ENST00000362976 153 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 RNU6-339P-201ENST00000384310 107 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 MIR1285-1-201ENST00000408593 84 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 OR51A5P-201ENST00000415429 942 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 AC099677.1-201ENST00000420575 175 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 SFR1P2-201ENST00000421841 730 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 SNRPFP4-201ENST00000456366 242 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 AC021087.2-201ENST00000504656 1203 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 FAM206BP-201ENST00000510179 541 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 DNAJC19P9-201ENST00000555084 351 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 AL133241.1-201ENST00000556832 487 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 AC025048.6-202ENST00000627667 438 ntBASIC0.84□□□□□ -2.27
UBE2D4Q9Y2X8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.84□□□□□ -2.28
UBE2D4Q9Y2X8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 RNU6-989P-201ENST00000362756 107 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 RNU6-457P-201ENST00000363999 107 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 RNU6-712P-201ENST00000410558 100 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 EDDM3CP-201ENST00000415977 425 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 AL591704.2-201ENST00000421658 181 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 Z85994.2-201ENST00000434327 452 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 CKS1BP2-201ENST00000497342 240 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 AC008526.1-201ENST00000509149 338 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 RNU5F-8P-201ENST00000515941 111 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 RNU6-237P-201ENST00000515985 71 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms