Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MTCO1P20-201ENST00000425366 358 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 DPPA2P1-201ENST00000428060 556 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 GPR143P-201ENST00000434155 205 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 WASF1P1-201ENST00000447560 1131 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 NFU1P2-201ENST00000448700 469 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 AC027673.1-201ENST00000456245 405 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 snoU13.4-201ENST00000458916 104 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 SNORA31.22-201ENST00000517204 135 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 AC118273.2-201ENST00000532092 465 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 AL035413.2-201ENST00000604801 525 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 AL121992.2-201ENST00000606262 256 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 AL450472.3-201ENST00000615578 367 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 ZNF680P1-201ENST00000436625 1469 ntBASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
MRPS28Q9Y2Q9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 Y_RNA.38-201ENST00000362617 102 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 Y_RNA.367-201ENST00000365544 101 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 Y_RNA.453-201ENST00000384223 109 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 SNORD3H-201ENST00000384486 214 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 MIR558-201ENST00000384920 94 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AL109755.1-201ENST00000401791 649 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 RNU2-36P-201ENST00000410361 191 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 RNU2-62P-201ENST00000410868 191 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 HMGN1P24-201ENST00000412282 298 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 RPL30P16-201ENST00000419341 429 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 PPP1R11P2-201ENST00000423543 382 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 OR2AS1P-201ENST00000427827 319 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 ELOCP14-201ENST00000428070 331 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 ELOCP7-201ENST00000439968 331 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AL353572.1-201ENST00000442490 417 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC083798.1-201ENST00000472671 131 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 HMGN2P13-201ENST00000476476 274 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 RPL36AP51-201ENST00000487216 318 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC004062.1-201ENST00000509926 645 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC074344.1-201ENST00000512823 224 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC114797.1-201ENST00000514003 728 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 SNORA40.12-201ENST00000516329 111 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 SNORA64.4-201ENST00000516632 81 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 RNU1-45P-201ENST00000517191 141 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC006557.5-201ENST00000603126 811 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC012507.3-201ENST00000603556 477 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC010591.1-201ENST00000603941 649 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC007621.1-201ENST00000604544 437 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC008536.2-201ENST00000607284 349 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 TUG1_1.1-201ENST00000610654 145 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 TUG1_2.1-201ENST00000614234 87 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC243312.2-201ENST00000623340 601 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC019226.1-201ENST00000625666 515 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 AC099654.14-201ENST00000638599 341 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
MRPS28Q9Y2Q9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MRPS28Q9Y2Q9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
MRPS28Q9Y2Q9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MRPS28Q9Y2Q9 HSPE1P11-201ENST00000339579 310 ntBASIC2.92□□□□□ -1.94
MRPS28Q9Y2Q9 RNU5E-6P-201ENST00000365574 115 ntBASIC2.92□□□□□ -1.94
MRPS28Q9Y2Q9 U8.11-201ENST00000384699 133 ntBASIC2.92□□□□□ -1.94
MRPS28Q9Y2Q9 U8.12-201ENST00000384701 133 ntBASIC2.92□□□□□ -1.94
MRPS28Q9Y2Q9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
MRPS28Q9Y2Q9 RNU6-882P-201ENST00000391025 103 ntBASIC2.92□□□□□ -1.94
MRPS28Q9Y2Q9 RPS3AP24-201ENST00000407896 734 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms