Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MIR493-201ENST00000385254 89 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 RPS3AP24-201ENST00000407896 734 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 TPMTP3-201ENST00000411928 735 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 DPH3P2-201ENST00000422618 250 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 AL356867.1-201ENST00000429623 299 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 UBE2V1P13-201ENST00000436983 439 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 FGF7P5-201ENST00000441829 291 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 Z73417.1-201ENST00000447373 778 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 MTND1P31-201ENST00000449206 961 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 RPL23AP35-201ENST00000451906 501 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 AC021382.1-201ENST00000483523 359 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 RPL23AP49-201ENST00000492925 468 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 AC108210.2-201ENST00000503681 201 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 RNU6-991P-201ENST00000516168 107 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 SNORA70.16-201ENST00000516390 95 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 RNA5SP402-201ENST00000517148 110 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 DUXAP1-201ENST00000556632 463 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 MIR1273D-201ENST00000577266 86 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 AC105224.1-201ENST00000587055 421 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 AC013562.2-201ENST00000611632 603 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 AC010733.2-201ENST00000589496 5702 ntBASIC3.04□□□□□ -1.92
NPC1L1Q9UHC9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 RNU6-799P-201ENST00000363567 107 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 OR5H15-201ENST00000383696 930 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 RNU6-157P-201ENST00000383957 107 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 SNORA48.3-201ENST00000391081 134 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 RNA5SP181-201ENST00000410246 98 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 RNU6-757P-201ENST00000410334 100 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 MTCO2P21-201ENST00000419780 677 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 HMGN2P3-201ENST00000433603 273 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 HMGN2P5-201ENST00000436882 273 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 RNU6-415P-201ENST00000516252 97 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 MTCYBP20-201ENST00000524239 1129 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 AC011260.1-201ENST00000578420 472 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 AL133507.1-201ENST00000605269 557 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 AL138880.2-201ENST00000616214 239 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 AL136981.2-201ENST00000617319 734 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 AC009268.2-201ENST00000621925 457 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 ZNF355P-201ENST00000427301 3216 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 ZNF876P-202ENST00000398732 1485 ntBASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPC1L1Q9UHC9 SDAD1P2-201ENST00000441308 2028 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 RNU6-343P-201ENST00000364709 104 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 RNU6-76P-201ENST00000384060 104 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 RNU6-83P-201ENST00000384568 112 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 AC007064.1-201ENST00000412238 351 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 MTND1P21-201ENST00000412991 285 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 MTND2P9-201ENST00000422293 931 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 AL590383.1-201ENST00000428602 75 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 AC034222.1-201ENST00000494052 532 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 SCARNA16.3-201ENST00000516595 184 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 RNU6-56P-201ENST00000516986 93 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 AC079597.1-201ENST00000624306 508 ntBASIC3.02□□□□□ -1.93
NPC1L1Q9UHC9 RNU5A-1-201ENST00000362698 116 ntBASIC3.01□□□□□ -1.93
NPC1L1Q9UHC9 RNU6-289P-201ENST00000364093 107 ntBASIC3.01□□□□□ -1.93
NPC1L1Q9UHC9 RNU6-744P-201ENST00000365557 107 ntBASIC3.01□□□□□ -1.93
NPC1L1Q9UHC9 RNU6-1316P-201ENST00000384242 108 ntBASIC3.01□□□□□ -1.93
NPC1L1Q9UHC9 MIR221-201ENST00000385135 110 ntBASIC3.01□□□□□ -1.93
NPC1L1Q9UHC9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms