Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CTSFQ9UBX1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.32□□□□□ -2.04
CTSFQ9UBX1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.32□□□□□ -2.04
CTSFQ9UBX1 AC090615.1-201ENST00000577519 154 ntBASIC2.32□□□□□ -2.04
CTSFQ9UBX1 MIR5092-201ENST00000583139 88 ntBASIC2.32□□□□□ -2.04
CTSFQ9UBX1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.32□□□□□ -2.04
CTSFQ9UBX1 BBIP1P1-201ENST00000602999 279 ntBASIC2.32□□□□□ -2.04
CTSFQ9UBX1 AC009974.1-201ENST00000608881 455 ntBASIC2.32□□□□□ -2.04
CTSFQ9UBX1 OR10AB1P-201ENST00000609613 938 ntBASIC2.32□□□□□ -2.04
CTSFQ9UBX1 AC025594.3-201ENST00000613068 790 ntBASIC2.32□□□□□ -2.04
CTSFQ9UBX1 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
CTSFQ9UBX1 AC245884.12-201ENST00000615364 59 ntBASIC2.32□□□□□ -2.04
CTSFQ9UBX1 AC008443.7-201ENST00000622195 246 ntBASIC2.32□□□□□ -2.04
CTSFQ9UBX1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 Y_RNA.465-201ENST00000384293 102 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 MIR144-201ENST00000384886 86 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 MIR514A1-201ENST00000385133 98 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AL513331.1-201ENST00000411908 397 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 MTCO2P8-201ENST00000412213 658 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 HMGB1P49-201ENST00000418882 569 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC013410.2-201ENST00000422627 201 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 PPP1R11P2-201ENST00000423543 382 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 ZYG11AP1-201ENST00000430329 837 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AL049734.2-201ENST00000441066 616 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 DDX3P2-201ENST00000446138 111 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 MTND2P24-201ENST00000453434 806 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 SNORD121B-201ENST00000458838 81 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC107626.1-201ENST00000471084 183 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC234781.5-201ENST00000508429 271 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC114786.4-201ENST00000508771 728 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC114797.1-201ENST00000514003 728 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC087465.1-201ENST00000560574 245 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC009127.3-201ENST00000570531 403 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC005951.2-201ENST00000576282 495 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 RPS15AP11-201ENST00000594193 385 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AL158211.4-201ENST00000606988 584 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC004067.1-201ENST00000608733 700 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC107294.1-201ENST00000609524 467 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 BX664608.1-201ENST00000610519 487 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AL603758.1-201ENST00000618654 241 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC005539.1-201ENST00000443768 1479 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AL390862.1-201ENST00000635467 1469 ntBASIC2.31□□□□□ -2.04
CTSFQ9UBX1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CTSFQ9UBX1 AC010329.5-201ENST00000623497 2174 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 RNA5SP456-201ENST00000364002 114 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 RNU6-1207P-201ENST00000384343 107 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 RNU6-925P-201ENST00000384629 104 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 RNU6-920P-201ENST00000410926 92 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 MTCYBP38-201ENST00000417160 1123 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC018630.2-202ENST00000422992 927 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC007560.1-201ENST00000426912 237 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 COX7BP2-201ENST00000437976 242 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AL117351.1-201ENST00000438864 766 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 RPL32P28-201ENST00000443577 397 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 PTENP1-201ENST00000447117 1215 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 MEMO1P3-201ENST00000459811 302 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AL049874.1-201ENST00000489560 388 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 RN7SL636P-201ENST00000497504 294 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC138853.1-201ENST00000503549 823 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 SUMO2P6-201ENST00000505273 288 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC104090.1-201ENST00000506341 1171 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC107222.1-201ENST00000510899 637 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 RNU6-1256P-201ENST00000516539 103 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC068313.1-201ENST00000604028 1008 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AL161729.4-201ENST00000604650 476 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC245297.2-201ENST00000610119 565 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC005332.10-201ENST00000612725 619 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms