Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.33□□□□□ -2.04
CLCF1Q9UBD9 AC006378.2-201ENST00000623178 2476 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC010680.1-201ENST00000590024 3590 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 RNY4P24-201ENST00000362735 96 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 RNU6-270P-201ENST00000364131 105 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 MIR181B1-201ENST00000385240 110 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 RNA5SP492-201ENST00000411330 114 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AL513331.1-201ENST00000411908 397 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC098592.1-201ENST00000419352 333 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AL451054.2-201ENST00000420896 202 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC092047.1-201ENST00000424997 240 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 USP12PX-201ENST00000432383 1057 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 Z82210.1-201ENST00000440037 231 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AL606662.1-201ENST00000445763 553 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 BMI1P1-201ENST00000445879 941 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 RNU7-59P-201ENST00000459101 61 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC008481.1-201ENST00000463278 396 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 RPS20P22-201ENST00000473700 357 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 RPL23AP11-201ENST00000475260 469 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 OR5BM1P-201ENST00000512021 366 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 RNA5SP148-201ENST00000516527 94 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 ATP5F1P5-201ENST00000526403 760 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC243972.3-201ENST00000539655 198 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 ELOCP32-201ENST00000548625 324 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AL133153.1-201ENST00000557756 303 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 ISCA1P3-201ENST00000577104 373 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC068790.3-201ENST00000602988 553 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AP000811.1-201ENST00000603803 651 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AL161729.4-201ENST00000604650 476 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 BCRP9-201ENST00000605312 388 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 RPL23AP88-201ENST00000605759 454 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC007038.2-201ENST00000608095 740 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLCF1Q9UBD9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 MIR19A-201ENST00000384878 82 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 RPL19P1-201ENST00000411635 428 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 RPL21P24-201ENST00000413752 448 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AC007919.1-201ENST00000429380 217 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AC129850.1-201ENST00000436203 508 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 BNIP3P2-201ENST00000441221 577 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 PIGFP3-201ENST00000441918 722 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 RPL7P36-201ENST00000444633 681 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AL591719.1-201ENST00000444669 744 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 MTCYBP3-201ENST00000445588 1137 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AL513328.1-201ENST00000446460 224 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 ELOCP30-201ENST00000447108 299 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 MTND4LP3-201ENST00000468320 276 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 RPL23AP41-201ENST00000484754 458 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 LARP1BP2-201ENST00000486594 519 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 RNU6-390P-201ENST00000516259 103 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 RNU6-678P-201ENST00000516832 109 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AC100870.1-201ENST00000522035 505 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 HSPE1P20-201ENST00000538133 289 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AC002400.1-201ENST00000569310 726 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AC091965.4-201ENST00000607691 587 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AC103710.1-201ENST00000610003 901 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AC004852.3-201ENST00000614131 326 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 AC012150.2-201ENST00000621300 544 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 IGHVIII-44-202ENST00000636235 289 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 MTND4P16-201ENST00000466108 1367 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 CCT4P2-201ENST00000233836 1548 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.31□□□□□ -2.04
CLCF1Q9UBD9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AL590004.2-201ENST00000404787 371 ntBASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.3□□□□□ -2.04
CLCF1Q9UBD9 MTCO2P17-201ENST00000424336 677 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms