Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC010486.3-201ENST00000511602 785 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC026403.1-201ENST00000518938 295 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 RPS3AP4-201ENST00000555161 764 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AL391261.3-201ENST00000557194 520 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC010620.2-201ENST00000600135 313 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 CKS1BP3-201ENST00000600888 237 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC098826.3-201ENST00000603823 466 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AL161798.1-201ENST00000604630 131 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC019159.1-201ENST00000605094 187 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 FTX_3.1-201ENST00000610451 147 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AL591516.1-201ENST00000611326 274 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AL157817.1-201ENST00000614264 790 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC039056.2-201ENST00000622261 511 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AL603839.4-201ENST00000624658 1005 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC110079.1-202ENST00000635213 138 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 AC026241.1-201ENST00000517873 2142 ntBASIC3.19□□□□□ -1.9
CPSF2Q9P2I0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 RNU5E-1-201ENST00000362477 120 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 RNA5SP50-201ENST00000363731 107 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 RNU1-109P-201ENST00000383960 147 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 RNU6-14P-201ENST00000384630 106 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 HMGN1P14-201ENST00000412459 517 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 RPL7P37-201ENST00000425095 738 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AL589872.1-201ENST00000426602 288 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 RN7SL432P-201ENST00000484057 298 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 Y_RNA.672-201ENST00000516289 104 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AC023043.3-201ENST00000593113 385 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 BNIP3P8-201ENST00000597863 560 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AL670379.6-201ENST00000603753 252 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AL670379.11-201ENST00000604059 253 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AC008162.1-201ENST00000604718 254 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AL670379.1-201ENST00000604752 252 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AL670379.5-201ENST00000605253 252 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AL670379.12-201ENST00000605291 253 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AL670379.8-201ENST00000605353 252 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AL670379.7-201ENST00000605823 252 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AL451064.1-201ENST00000607718 471 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AL161629.2-201ENST00000615347 275 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 AC012442.3-202ENST00000636742 206 ntBASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CPSF2Q9P2I0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 FGF7P2-201ENST00000332473 296 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 VTRNA1-1-201ENST00000363120 99 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 U3.4-201ENST00000363352 213 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 RNU5E-6P-201ENST00000365574 115 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 MRPL42P2-201ENST00000403169 426 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 SNORD88.1-201ENST00000408684 91 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC090960.1-201ENST00000421072 306 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AL353678.1-201ENST00000422735 741 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC007283.2-201ENST00000424739 197 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 ELOCP14-201ENST00000428070 331 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC091286.1-201ENST00000431233 461 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 HMGN2P31-201ENST00000432430 273 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC119618.1-201ENST00000434191 222 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC122718.1-201ENST00000439448 744 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 ELOCP7-201ENST00000439968 331 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 NEFMP1-201ENST00000443423 1006 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 MTND6P13-201ENST00000443510 523 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 RPL21P133-201ENST00000443666 476 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 MTND4LP3-201ENST00000468320 276 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 RAP1BP2-201ENST00000478270 544 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 MTND1P3-201ENST00000484956 952 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 RPL21P13-201ENST00000488305 481 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC011979.2-201ENST00000527568 352 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AL590229.1-201ENST00000603497 542 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AL358072.1-201ENST00000604156 575 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC007363.1-201ENST00000604736 620 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC068276.1-201ENST00000605793 379 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms