Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RNA5SP310-201ENST00000459084 116 ntBASIC0.83□□□□□ -2.28
CHD7Q9P2D1 AC112198.4-201ENST00000515450 351 ntBASIC0.83□□□□□ -2.28
CHD7Q9P2D1 SNORA48.11-201ENST00000517015 89 ntBASIC0.83□□□□□ -2.28
CHD7Q9P2D1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.83□□□□□ -2.28
CHD7Q9P2D1 AC123912.3-201ENST00000600907 1367 ntBASIC0.83□□□□□ -2.28
CHD7Q9P2D1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.82□□□□□ -2.28
CHD7Q9P2D1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CHD7Q9P2D1 NACAP2-201ENST00000318548 624 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CHD7Q9P2D1 AC244035.1-201ENST00000430042 390 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 AL022238.1-201ENST00000442557 355 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 RPS27P21-201ENST00000486977 252 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 SMARCE1P4-201ENST00000523647 241 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CHD7Q9P2D1 AC135178.6-201ENST00000605314 398 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.82□□□□□ -2.28
CHD7Q9P2D1 CR382285.2-201ENST00000624662 1495 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.82□□□□□ -2.28
CHD7Q9P2D1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
CHD7Q9P2D1 Y_RNA.280-201ENST00000364765 112 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CHD7Q9P2D1 AC092745.2-202ENST00000411880 369 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 PABPC1P3-201ENST00000469174 459 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.82□□□□□ -2.28
CHD7Q9P2D1 MTND4LP5-201ENST00000605152 292 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 AC006065.5-201ENST00000623427 349 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 AC091932.3-201ENST00000624223 323 ntBASIC0.82□□□□□ -2.28
CHD7Q9P2D1 SNORA23-201ENST00000365128 182 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CHD7Q9P2D1 UBBP3-201ENST00000445497 241 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 AL035407.2-201ENST00000454090 378 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.81□□□□□ -2.28
CHD7Q9P2D1 OR6C7P-201ENST00000547875 934 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 AL050343.2-201ENST00000607338 280 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 MTND4P12-201ENST00000498999 1377 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 RPL21P104-201ENST00000464143 478 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.81□□□□□ -2.28
CHD7Q9P2D1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CHD7Q9P2D1 AC133485.1-201ENST00000567176 124 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 AC138907.6-201ENST00000568401 126 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.81□□□□□ -2.28
CHD7Q9P2D1 UBE2L4-201ENST00000587688 464 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.81□□□□□ -2.28
CHD7Q9P2D1 AC103810.9-201ENST00000606688 112 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 Z69720.2-201ENST00000624755 279 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 AL137003.2-201ENST00000606924 2538 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 RNU6-105P-201ENST00000363909 104 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 AC019070.1-201ENST00000415008 1024 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.81□□□□□ -2.28
CHD7Q9P2D1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.81□□□□□ -2.28
CHD7Q9P2D1 USP12PX-201ENST00000432383 1057 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 KLRA1P-201ENST00000503499 986 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 HMGB3P3-201ENST00000510526 400 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 MIR5194-201ENST00000582634 120 ntBASIC0.81□□□□□ -2.28
CHD7Q9P2D1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
CHD7Q9P2D1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
CHD7Q9P2D1 HMGN2P30-201ENST00000423237 256 ntBASIC0.8□□□□□ -2.28
CHD7Q9P2D1 AC023141.11-201ENST00000508864 202 ntBASIC0.8□□□□□ -2.28
CHD7Q9P2D1 SNORA31.20-201ENST00000517111 133 ntBASIC0.8□□□□□ -2.28
CHD7Q9P2D1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.8□□□□□ -2.28
CHD7Q9P2D1 U8.3-201ENST00000363321 132 ntBASIC0.8□□□□□ -2.28
CHD7Q9P2D1 SDR42E1P2-201ENST00000614861 481 ntBASIC0.8□□□□□ -2.28
CHD7Q9P2D1 AL589935.2-201ENST00000616471 1231 ntBASIC0.8□□□□□ -2.28
CHD7Q9P2D1 SDR42E1P4-201ENST00000620894 481 ntBASIC0.8□□□□□ -2.28
CHD7Q9P2D1 AC006249.1-201ENST00000621223 471 ntBASIC0.8□□□□□ -2.28
CHD7Q9P2D1 ELL2P3-201ENST00000457883 1602 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 CISD1P1-201ENST00000393907 327 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 LINC01347-201ENST00000417964 355 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 AL356867.1-201ENST00000429623 299 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.79□□□□□ -2.28
CHD7Q9P2D1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.79□□□□□ -2.28
CHD7Q9P2D1 GTF2IP12-201ENST00000456547 356 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 AC104997.1-201ENST00000519761 717 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 APOOP3-201ENST00000536787 586 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 NBEAP1-201ENST00000554452 979 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 AC087465.1-201ENST00000560574 245 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 SNORD84-203ENST00000584275 78 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 RNA5SP331-201ENST00000364986 107 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 AC096745.1-201ENST00000509945 370 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 BTF3P12-201ENST00000519620 469 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 AC022880.1-201ENST00000534017 973 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 RNA5SP108-201ENST00000605921 117 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 OR4G3P-201ENST00000633500 913 ntBASIC0.79□□□□□ -2.28
CHD7Q9P2D1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.79□□□□□ -2.28
CHD7Q9P2D1 MTND5P11-201ENST00000511037 1812 ntBASIC0.78□□□□□ -2.28
CHD7Q9P2D1 UBE2V1P9-201ENST00000414760 368 ntBASIC0.78□□□□□ -2.28
CHD7Q9P2D1 AC004854.1-201ENST00000440356 349 ntBASIC0.78□□□□□ -2.28
CHD7Q9P2D1 PMCHL2-203ENST00000457791 237 ntBASIC0.78□□□□□ -2.28
CHD7Q9P2D1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.78□□□□□ -2.28
CHD7Q9P2D1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.78□□□□□ -2.28
CHD7Q9P2D1 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.78□□□□□ -2.28
CHD7Q9P2D1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
CHD7Q9P2D1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.78□□□□□ -2.28
CHD7Q9P2D1 SNRPEP3-201ENST00000338402 276 ntBASIC0.78□□□□□ -2.28
CHD7Q9P2D1 LRRC34P2-201ENST00000514850 553 ntBASIC0.78□□□□□ -2.28
CHD7Q9P2D1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.78□□□□□ -2.28
CHD7Q9P2D1 AC005786.1-201ENST00000588553 154 ntBASIC0.78□□□□□ -2.28
CHD7Q9P2D1 BNIP3P7-201ENST00000605641 516 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms