Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 U4.5-201ENST00000617137 123 ntBASIC3.59□□□□□ -1.83
LRFN1Q9P244 AC139792.3-201ENST00000623525 224 ntBASIC3.59□□□□□ -1.83
LRFN1Q9P244 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.59□□□□□ -1.83
LRFN1Q9P244 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.59□□□□□ -1.83
LRFN1Q9P244 AC005183.1-201ENST00000603687 1979 ntBASIC3.59□□□□□ -1.83
LRFN1Q9P244 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.59□□□□□ -1.83
LRFN1Q9P244 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LRFN1Q9P244 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.59□□□□□ -1.84
LRFN1Q9P244 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
LRFN1Q9P244 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LRFN1Q9P244 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRFN1Q9P244 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 Y_RNA.481-201ENST00000384373 102 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 MIR591-201ENST00000385290 95 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AC068050.1-201ENST00000394891 380 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 AC093578.1-201ENST00000415219 368 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 HMGB3P20-201ENST00000417997 600 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 MTATP6P13-201ENST00000438531 667 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 NOTCH2P1-201ENST00000443481 624 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 RANP8-201ENST00000444720 713 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 DPPA3P1-201ENST00000448050 469 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AC010099.1-201ENST00000455434 375 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AC105417.1-201ENST00000514691 285 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 AC104383.1-201ENST00000530297 370 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AC103843.2-201ENST00000530523 682 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 RANP3-201ENST00000530970 276 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AL121576.1-201ENST00000556055 276 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 AC004805.2-201ENST00000605382 482 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 MIR15A-201ENST00000607334 83 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AF250324.2-201ENST00000608299 610 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AC068944.2-201ENST00000610373 403 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AL121772.2-201ENST00000614331 297 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 AC012314.7-201ENST00000619693 93 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 U6.114-201ENST00000636407 96 ntBASIC3.58□□□□□ -1.84
LRFN1Q9P244 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRFN1Q9P244 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRFN1Q9P244 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRFN1Q9P244 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.58□□□□□ -1.84
LRFN1Q9P244 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRFN1Q9P244 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRFN1Q9P244 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRFN1Q9P244 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRFN1Q9P244 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC010680.1-201ENST00000590024 3590 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 MAPK10-322ENST00000641485 4530 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRFN1Q9P244 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRFN1Q9P244 AL139276.1-201ENST00000311910 1001 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRFN1Q9P244 RNU6-1085P-201ENST00000363576 107 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 RNU6-1322P-201ENST00000364309 107 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRFN1Q9P244 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 RNU6-1158P-201ENST00000391167 107 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC009237.5-201ENST00000414271 501 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRFN1Q9P244 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 RPL23AP82-202ENST00000427528 469 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 HMGB1P37-201ENST00000439613 609 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 ELOCP23-201ENST00000452014 332 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC027673.1-201ENST00000456245 405 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 GMFBP1-201ENST00000467831 427 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 HMGN2P13-201ENST00000476476 274 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 SUMO2P6-201ENST00000505273 288 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC117522.3-201ENST00000507974 584 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 RBBP4P6-201ENST00000508098 202 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC009646.1-201ENST00000510455 318 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 RNU6-143P-201ENST00000516942 93 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 RNA5SP503-201ENST00000517047 117 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC087369.1-201ENST00000520775 996 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRFN1Q9P244 AP003122.3-201ENST00000526316 255 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC084851.1-201ENST00000529105 249 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AP000867.2-201ENST00000532468 320 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AL512310.1-201ENST00000548639 172 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC012468.1-201ENST00000604888 430 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms